BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C01LP1|AL429531
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1193 1734 0.0
>3x_Contig1193
Length = 4968
Score = 1734 bits (872), Expect = 0.0
Identities = 878/882 (99%)
Strand = Plus / Plus
Query: 1 atcctgcaacgtttaaattggttagtaaggtgacaaaatctgtggattcatcgatcgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atcctgcaacgtttaaattggttagtaaggtgacaaaatctgtggattcatcgatcgcag 197
Query: 61 atggacataatcgtcctagctgcgaccaaaaaagtatggaacaagaaaacttaccatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atggacataatcgtcctagctgcgaccaaaaaagtatggaacaagaaaacttaccatttc 257
Query: 121 aatacgttaatgcgcgggtgttctgatatgtatcgattacacgatataattcgagaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aatacgttaatgcgcgggtgttctgatatgtatcgattacacgatataattcgagaatct 317
Query: 181 gttaaaggttttattacgtctgttggttgctacgtaatgttttcgttgtctatctttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gttaaaggttttattacgtctgttggttgctacgtaatgttttcgttgtctatctttttg 377
Query: 241 caatactgtattttcatgtttttcaatatggcatggaaatattagatgccctaccaaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caatactgtattttcatgtttttcaatatggcatggaaatattagatgccctaccaaggg 437
Query: 301 aacaaataaaacaaaccaaagtagtccggacagttttcaaaagtttttatgccatgcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aacaaataaaacaaaccaaagtagtccggacagttttcaaaagtttttatgccatgcact 497
Query: 361 gggtaagtcatacttagatatatattavrtaatgacaatacgatatgtttcttccaacag 420
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 498 gggtaagtcatacttagatatatattaaataatgacaatacgatatgtttcttccaacag 557
Query: 421 aaggaacagggttcattcaaatttgagtcagttttaatgaaaggtttggtttacctgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aaggaacagggttcattcaaatttgagtcagttttaatgaaaggtttggtttacctgaat 617
Query: 481 cgtattcaattcttaacatggcccacgtcaaatccacaatcactgacgagatggctaacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cgtattcaattcttaacatggcccacgtcaaatccacaatcactgacgagatggctaacg 677
Query: 541 cataaaccaaagaratggcatagaaaaagttactattaccggagcctaatccaatccata 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 cataaaccaaagaaatggcatagaaaaagttactattaccggagcctaatccaatccata 737
Query: 601 ggtagtagaagattggtgacaaaatgatggcatgaatgaataasagggttgatatgactg 660
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 738 ggtagtagaagattggtgacaaaatgatggcatgaatgaataaaagggttgatatgactg 797
Query: 661 gatatcttagatacccaaagatcggtttgaaaaatgggataaaacttaagaaaaaccctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gatatcttagatacccaaagatcggtttgaaaaatgggataaaacttaagaaaaaccctc 857
Query: 721 cgtcacctaacgttgggtatgatttggtgagcgtaatccaacctagacatagaacaaatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 cgtcacctaacgttgggtatgatttggtgagcgtaatccaacctagacatagaacaaatg 917
Query: 781 cgtaaaacgattgctgattgaatctaatagtgaaaggtgggataaatgaaacaacaaata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 cgtaaaacgattgctgattgaatctaatagtgaaaggtgggataaatgaaacaacaaata 977
Query: 841 tgttgaacacagatttgaaaaatgggatgaaaaattcgaaca 882
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 tgttgaacacagatttgaaaaatgggatgaaaaattcgaaca 1019
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7239
Number of Sequences: 1807
Number of extensions: 7239
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)